Helicobacter pylori Gambia94/24

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori Gambia94/24 is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and single-cell arrangement. It possesses flagella, which typically aid in mobility, but in this case, the organism is noted as non-motile. This bacterium is host-associated and thrives optimally at a temperature of 37°C, falling within the mesophilic range. H. pylori Gambia94/24 has a unique genetic structure with two replicons and is surrounded by two membranes. It is recognized for its free-living biotic relationship, which suggests a level of independence from a specific host organism. The accessions for this strain are NC_017364.1 and NC_017371.1, indicating its genetic sequences are cataloged for further research. The ecological insight provided by the traits of H. pylori Gambia94/24 suggests its adaptability to distinct environments within host organisms, specifically the gastric niche, where it can survive and thrive in microaerophilic conditions. This capability highlights the organism's role in the human microbiome and its potential implications in gastric health and disease.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainGambia94/24

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori Gambia94/24
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori Gambia94/24, complete sequence.

Gene Summary

Adenine Count

515482 bp

Thymine Count

525403 bp

Guanine Count

332186 bp

Cytosine Count

336840 bp

Genome Length

1709911 bp

Protein-coding Genes

1569 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
feccd family abc transporter permeaseHPGAM_RS04415Not AvailableNegative926342 - 92732234612.9
sdr family oxidoreductaseHPGAM_RS04420Not AvailableNegative927315 - 92817231585.4
acyl-coa thioesteraseHPGAM_RS04425Not AvailablePositive928312 - 92883619522.6
type ii toxin-antitoxin system yafq family toxinHPGAM_RS04430Not AvailableNegative928880 - 92921212800.1
duf3944 domain-containing proteinHPGAM_RS04435Not AvailableNegative929221 - 9295039273.58
hypothetical proteinHPGAM_RS04440Not AvailableNegative930074 - 93043314076.8
type ii toxin-antitoxin system mrna interferase toxin, rele/stbe familyHPGAM_RS04445Not AvailableNegative930513 - 9307499207.51
type ii toxin-antitoxin system antitoxinHPGAM_RS04450Not AvailableNegative930763 - 93105011408.8
type ii toxin-antitoxin system yafq family toxinHPGAM_RS04455Not AvailableNegative931098 - 93136410373.9
hypothetical proteinHPGAM_RS04460Not AvailableNegative931345 - 93171014374.1

Displaying genes 891 – 900 of 1640 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.