Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class f sortase | RAM_RS04680 | Not Available | Positive | 983265 - 983912 | 22421.9 |
| voc family protein | RAM_RS04685 | Not Available | Positive | 983993 - 984796 | 28512.4 |
| glycerol kinase glpk | RAM_RS04690 | Not Available | Negative | 984845 - 986359 | 55061.0 |
| mip/aquaporin family protein | RAM_RS04695 | Not Available | Negative | 986394 - 987143 | 25971.6 |
| glycerol-3-phosphate dehydrogenase/oxidase | RAM_RS04700 | Not Available | Positive | 987403 - 989136 | 62902.9 |
| tetr family transcriptional regulator | RAM_RS04705 | Not Available | Negative | 989172 - 989759 | 21551.6 |
| sdr family oxidoreductase | RAM_RS04710 | Not Available | Positive | 989879 - 990772 | 30115.3 |
| gnat family n-acetyltransferase | RAM_RS04715 | Not Available | Negative | 990820 - 991350 | 19627.2 |
| hypothetical protein | RAM_RS04720 | Not Available | Negative | 991410 - 992435 | 35164.1 |
| duf1707 domain-containing protein | RAM_RS04725 | Not Available | Negative | 992512 - 992907 | 13965.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
