Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein biosynthesis integral membrane protein murj | RAM_RS47065 | Not Available | Positive | 10218589 - 10220475 | 66910.6 |
| protein kinase family protein | RAM_RS47070 | Not Available | Positive | 10220555 - 10222150 | 55423.5 |
| rna polymerase sigma factor sigm | RAM_RS47075 | Not Available | Positive | 10222182 - 10222805 | 22570.8 |
| hypothetical protein | RAM_RS47080 | Not Available | Positive | 10222802 - 10223611 | 26884.1 |
| thioredoxin-disulfide reductase | RAM_RS47085 | Not Available | Positive | 10223691 - 10224683 | 35341.6 |
| thioredoxin | RAM_RS47090 | Not Available | Positive | 10224719 - 10225042 | 11598.1 |
| n-acetylmuramoyl-l-alanine amidase | RAM_RS47095 | Not Available | Positive | 10225325 - 10226473 | 41649.7 |
| gnat family n-acetyltransferase | RAM_RS47100 | Not Available | Negative | 10226685 - 10227329 | 23450.2 |
| plp-dependent aminotransferase family protein | RAM_RS47105 | Not Available | Positive | 10227542 - 10228879 | 48612.2 |
| d-alanine--d-alanine ligase | RAM_RS47110 | Not Available | Positive | 10228967 - 10229911 | 32876.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
