Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine--trna ligase | RAM_RS46965 | Not Available | Negative | 10187351 - 10190191 | 106159.0 |
| esterase-like activity of phytase family protein | RAM_RS46970 | Not Available | Negative | 10190385 - 10191545 | 41230.1 |
| sdpi family protein | RAM_RS46975 | Not Available | Positive | 10191612 - 10192031 | 13459.8 |
| yqge/algh family protein | RAM_RS46980 | Not Available | Negative | 10192028 - 10192651 | 21929.1 |
| mfs transporter | RAM_RS46985 | Not Available | Positive | 10192812 - 10194104 | 44312.8 |
| ybab/ebfc family nucleoid-associated protein | RAM_RS46990 | Not Available | Positive | 10194247 - 10194780 | 19044.4 |
| wxg100 family type vii secretion target | RAM_RS46995 | Not Available | Positive | 10194780 - 10195103 | 10760.4 |
| toxin glutamine deamidase domain-containing protein | RAM_RS50970 | Not Available | Positive | 10195119 - 10202201 | 251897.0 |
| hypothetical protein | RAM_RS47010 | Not Available | Positive | 10202201 - 10202650 | 16804.7 |
| glycohydrolase toxin tnt-related protein | RAM_RS47015 | Not Available | Positive | 10202716 - 10204062 | 50099.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
