Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase | RAM_RS45890 | Not Available | Positive | 9967439 - 9967897 | 16967.4 |
| ferredoxin reductase | RAM_RS45895 | Not Available | Positive | 9967894 - 9968592 | 25073.4 |
| 2fe-2s iron-sulfur cluster-binding protein | RAM_RS45900 | Not Available | Positive | 9968589 - 9968885 | 10256.7 |
| ycii family protein | RAM_RS45905 | Not Available | Negative | 9968880 - 9969158 | 10311.3 |
| rna polymerase sigma factor | RAM_RS45910 | Not Available | Positive | 9969359 - 9969931 | 20714.9 |
| n-acetylglucosamine-6-phosphate deacetylase | RAM_RS45915 | Not Available | Positive | 9970023 - 9971174 | 39990.0 |
| hypothetical protein | RAM_RS45920 | Not Available | Positive | 9971198 - 9971647 | 14896.5 |
| deda family protein | RAM_RS45925 | Not Available | Positive | 9971692 - 9972393 | 25694.9 |
| type ii toxin-antitoxin system vapc family toxin | RAM_RS45930 | Not Available | Negative | 9972383 - 9972799 | 14751.7 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | RAM_RS45935 | Not Available | Negative | 9972799 - 9973071 | 9676.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
