Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | RAM_RS45635 | Not Available | Negative | 9915134 - 9915916 | 27395.6 |
| abc transporter substrate-binding protein | RAM_RS45640 | Not Available | Negative | 9915918 - 9916736 | 28338.5 |
| adenylosuccinate lyase | RAM_RS45645 | Not Available | Negative | 9916888 - 9918315 | 52352.9 |
| galactonate dehydratase | RAM_RS45650 | Not Available | Negative | 9918362 - 9919507 | 41288.2 |
| sdr family nad(p)-dependent oxidoreductase | RAM_RS45655 | Not Available | Negative | 9919523 - 9920200 | 23229.7 |
| lactonase family protein | RAM_RS45660 | Not Available | Positive | 9920395 - 9921399 | 34127.1 |
| fadr/gntr family transcriptional regulator | RAM_RS45665 | Not Available | Positive | 9921451 - 9922155 | 25619.5 |
| tetr/acrr family transcriptional regulator | RAM_RS45670 | Not Available | Negative | 9922137 - 9922751 | 21941.3 |
| hypothetical protein | RAM_RS45675 | Not Available | Negative | 9922786 - 9923496 | 23625.5 |
| sige family rna polymerase sigma factor | RAM_RS45680 | Not Available | Negative | 9923489 - 9923998 | 19301.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
