Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RAM_RS45490 | Not Available | Negative | 9885358 - 9885663 | 11188.2 |
| duf397 domain-containing protein | RAM_RS45495 | Not Available | Negative | 9885650 - 9885889 | 8445.88 |
| helix-turn-helix domain-containing protein | RAM_RS45500 | Not Available | Negative | 9886144 - 9887022 | 33641.6 |
| sam-dependent methyltransferase | RAM_RS45505 | Not Available | Positive | 9887223 - 9888020 | 29764.3 |
| sterol carrier family protein | RAM_RS45510 | Not Available | Negative | 9888034 - 9888414 | 13360.0 |
| type vii secretion system-associated protein | RAM_RS45515 | Not Available | Positive | 9888471 - 9889175 | 25806.6 |
| lysozyme | RAM_RS45520 | Not Available | Positive | 9889280 - 9890080 | 28417.9 |
| lysozyme | RAM_RS45525 | Not Available | Positive | 9890273 - 9891142 | 31714.5 |
| hypothetical protein | RAM_RS45530 | Not Available | Positive | 9891361 - 9892260 | 30826.6 |
| pentapeptide repeat-containing protein | RAM_RS45535 | Not Available | Positive | 9892265 - 9893371 | 41205.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
