Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-oxoprolinase subunit b family protein | RAM_RS45390 | Not Available | Positive | 9866765 - 9867361 | 21015.0 |
| biotin-dependent carboxyltransferase family protein | RAM_RS45395 | Not Available | Positive | 9867373 - 9868203 | 27716.3 |
| hypothetical protein | RAM_RS45400 | Not Available | Positive | 9868302 - 9868727 | 15138.0 |
| aminodeoxychorismate lyase | RAM_RS45405 | Not Available | Negative | 9868706 - 9869554 | 30116.3 |
| ygfz/gcvt domain-containing protein | RAM_RS45410 | Not Available | Positive | 9869689 - 9870819 | 40252.7 |
| hypothetical protein | RAM_RS45415 | Not Available | Positive | 9870869 - 9871432 | 20598.1 |
| asparaginase | RAM_RS45420 | Not Available | Positive | 9871429 - 9872361 | 31871.4 |
| hypothetical protein | RAM_RS45425 | Not Available | Negative | 9872461 - 9873357 | 32720.8 |
| duf3073 domain-containing protein | RAM_RS45430 | Not Available | Positive | 9873565 - 9873753 | 7162.86 |
| 3-hydroxybutyryl-coa dehydrogenase | RAM_RS45435 | Not Available | Positive | 9873904 - 9874758 | 30623.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
