Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | RAM_RS44890 | Not Available | Negative | 9767273 - 9768154 | 33091.7 |
| transposase | RAM_RS44895 | Not Available | Negative | 9768151 - 9768441 | 11061.1 |
| dna polymerase iii subunit gamma and tau | RAM_RS44900 | Not Available | Negative | 9768689 - 9770881 | 75694.3 |
| alf repeat-containing protein | RAM_RS44905 | Not Available | Negative | 9770963 - 9772489 | 52478.9 |
| spermidine synthase | RAM_RS44910 | Not Available | Positive | 9772545 - 9773420 | 31174.4 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 9773644 - 9773738 | Not Available |
| gtp-binding protein | RAM_RS44915 | Not Available | Negative | 9773804 - 9774403 | 21153.3 |
| duf742 domain-containing protein | RAM_RS44920 | Not Available | Negative | 9774381 - 9774734 | 12843.7 |
| roadblock/lc7 domain-containing protein | RAM_RS44925 | Not Available | Negative | 9774801 - 9775235 | 14935.1 |
| nitrate- and nitrite sensing domain-containing protein | RAM_RS44930 | Not Available | Negative | 9775232 - 9778042 | 98576.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
