Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6541 family protein | RAM_RS44840 | Not Available | Positive | 9758279 - 9760339 | 72284.2 |
| hypothetical protein | RAM_RS44845 | Not Available | Negative | 9760349 - 9761638 | 44188.2 |
| glycosyltransferase family 2 protein | RAM_RS44850 | Not Available | Negative | 9761635 - 9762654 | 36710.9 |
| udp-n-acetyl glucosamine 2-epimerase | RAM_RS44855 | Not Available | Positive | 9762726 - 9763835 | 41633.3 |
| glucosaminidase domain-containing protein | RAM_RS44860 | Not Available | Positive | 9763892 - 9764449 | 19960.8 |
| recombination mediator recr | RAM_RS44865 | Not Available | Negative | 9764446 - 9765042 | 21813.5 |
| ybab/ebfc family nucleoid-associated protein | RAM_RS44870 | Not Available | Negative | 9765048 - 9765407 | 11925.1 |
| n-acetylmuramoyl-l-alanine amidase | RAM_RS44875 | Not Available | Positive | 9765486 - 9766349 | 28662.4 |
| winged helix-turn-helix transcriptional regulator | RAM_RS44880 | Not Available | Negative | 9766334 - 9766687 | 12770.6 |
| tigr03618 family f420-dependent ppox class oxidoreductase | RAM_RS44885 | Not Available | Positive | 9766737 - 9767168 | 15949.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
