Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycii family protein | RAM_RS44790 | Not Available | Positive | 9747694 - 9748050 | 13069.6 |
| rna polymerase sigma factor | RAM_RS44795 | Not Available | Positive | 9748047 - 9749243 | 42968.4 |
| abc transporter atp-binding protein | RAM_RS44800 | Not Available | Negative | 9749291 - 9750403 | 40493.5 |
| abc transporter atp-binding protein | RAM_RS44805 | Not Available | Negative | 9750400 - 9751395 | 36075.1 |
| abc transporter permease | RAM_RS44810 | Not Available | Negative | 9751403 - 9752332 | 32806.1 |
| abc transporter permease | RAM_RS44815 | Not Available | Negative | 9752329 - 9753330 | 35914.0 |
| abc transporter substrate-binding protein | RAM_RS44820 | Not Available | Negative | 9753417 - 9754964 | 56589.4 |
| duf2304 domain-containing protein | RAM_RS44825 | Not Available | Negative | 9754996 - 9755367 | 13162.6 |
| glycosyltransferase family 2 protein | RAM_RS44830 | Not Available | Negative | 9755381 - 9756130 | 26233.8 |
| duf6541 family protein | RAM_RS44835 | Not Available | Negative | 9756143 - 9758113 | 69071.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
