Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | RAM_RS44310 | Not Available | Positive | 9651266 - 9653830 | 89256.2 |
| bifunctional dna primase/polymerase | RAM_RS44315 | Not Available | Negative | 9653923 - 9654540 | 22659.9 |
| rv3654c family tade-like protein | RAM_RS48245 | Not Available | Negative | 9655517 - 9655954 | 14669.5 |
| tade family type iv pilus minor pilin | RAM_RS44320 | Not Available | Negative | 9655941 - 9656276 | 11079.3 |
| duf4244 domain-containing protein | RAM_RS44325 | Not Available | Negative | 9656297 - 9656473 | 6291.63 |
| type ii secretion system f family protein | RAM_RS44330 | Not Available | Negative | 9656504 - 9657220 | 23908.3 |
| type ii secretion system f family protein | RAM_RS44335 | Not Available | Negative | 9657217 - 9657975 | 26086.3 |
| tada family conjugal transfer-associated atpase | RAM_RS44340 | Not Available | Negative | 9658007 - 9659158 | 40331.7 |
| septum site-determining protein ssd | RAM_RS44345 | Not Available | Negative | 9659633 - 9660700 | 36671.3 |
| had family hydrolase | RAM_RS44350 | Not Available | Positive | 9661340 - 9662170 | 29824.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
