Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase, cytochrome b556 subunit | RAM_RS04330 | Not Available | Negative | 909035 - 909478 | 16280.1 |
| npcbm/new2 domain-containing protein | RAM_RS04335 | Not Available | Positive | 909874 - 911865 | 70782.2 |
| glycoside hydrolase family 97 protein | RAM_RS04340 | Not Available | Positive | 911877 - 913733 | 65938.9 |
| bmp family lipoprotein | RAM_RS04345 | Not Available | Positive | 914021 - 915163 | 38358.0 |
| abc transporter atp-binding protein | RAM_RS04350 | Not Available | Positive | 915242 - 916813 | 55504.7 |
| abc transporter permease | RAM_RS04355 | Not Available | Positive | 916810 - 917901 | 37418.6 |
| abc transporter permease | RAM_RS04360 | Not Available | Positive | 917898 - 919163 | 44196.3 |
| cytidine deaminase | RAM_RS04365 | Not Available | Positive | 919164 - 919553 | 13187.8 |
| thymidine phosphorylase | RAM_RS04370 | Not Available | Positive | 919550 - 920827 | 43138.6 |
| hypothetical protein | RAM_RS04375 | Not Available | Negative | 920925 - 922049 | 40908.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
