Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | RAM_RS00340 | Not Available | Positive | 71594 - 73084 | 53842.1 |
| abc transporter permease | RAM_RS00345 | Not Available | Positive | 73081 - 74025 | 33156.6 |
| abc transporter permease | RAM_RS00350 | Not Available | Positive | 74025 - 74831 | 28233.4 |
| abc transporter atp-binding protein | RAM_RS00355 | Not Available | Positive | 74828 - 75559 | 26150.8 |
| abc transporter atp-binding protein | RAM_RS00360 | Not Available | Positive | 75556 - 76329 | 28384.2 |
| aldehyde dehydrogenase family protein | RAM_RS00365 | Not Available | Positive | 76322 - 77734 | 49374.3 |
| sdr family nad(p)-dependent oxidoreductase | RAM_RS00370 | Not Available | Positive | 77731 - 78486 | 26062.0 |
| amidase | RAM_RS00375 | Not Available | Positive | 78496 - 79881 | 48329.5 |
| is110 family transposase | RAM_RS00380 | Not Available | Negative | 79954 - 81165 | 43511.7 |
| rna polymerase sigma factor | RAM_RS00385 | Not Available | Positive | 81406 - 81927 | 19126.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
