Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | RAM_RS43680 | Not Available | Positive | 9518236 - 9518829 | 21728.8 |
| cu044_5270 family protein | RAM_RS43685 | Not Available | Positive | 9518822 - 9519877 | 37501.3 |
| dna repair protein rada | RAM_RS43690 | Not Available | Negative | 9519878 - 9521236 | 47068.9 |
| hypothetical protein | RAM_RS43695 | Not Available | Negative | 9521276 - 9521965 | 22713.7 |
| card family transcriptional regulator | RAM_RS43700 | Not Available | Positive | 9522252 - 9522743 | 18100.7 |
| ispd/tari family cytidylyltransferase | RAM_RS43705 | Not Available | Positive | 9522891 - 9523505 | 21122.5 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | RAM_RS43710 | Not Available | Positive | 9523502 - 9523969 | 15512.3 |
| ppox class f420-dependent oxidoreductase | RAM_RS43715 | Not Available | Positive | 9523998 - 9524393 | 14453.2 |
| ppox class f420-dependent oxidoreductase | RAM_RS43720 | Not Available | Positive | 9524404 - 9524790 | 14023.4 |
| had family hydrolase | RAM_RS43725 | Not Available | Positive | 9524813 - 9525499 | 25328.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
