Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spvb/tcac n-terminal domain-containing protein | RAM_RS43580 | Not Available | Positive | 9492035 - 9495175 | 113415.0 |
| rna polymerase sigma factor sigj | RAM_RS43585 | Not Available | Negative | 9495144 - 9496025 | 31393.6 |
| carboxymuconolactone decarboxylase family protein | RAM_RS43590 | Not Available | Positive | 9496187 - 9496582 | 13937.8 |
| alpha-l-fucosidase | RAM_RS43595 | Not Available | Positive | 9496690 - 9499500 | 101046.0 |
| hypothetical protein | RAM_RS43600 | Not Available | Negative | 9499489 - 9500112 | 22391.5 |
| duf2716 domain-containing protein | RAM_RS43605 | Not Available | Positive | 9500190 - 9501353 | 42832.2 |
| peptidase s8 | RAM_RS43610 | Not Available | Negative | 9501342 - 9502571 | 40769.2 |
| chitobiase/beta-hexosaminidase c-terminal domain-containing protein | RAM_RS43615 | Not Available | Positive | 9502841 - 9505168 | 81397.3 |
| erythromycin esterase family protein | RAM_RS43620 | Not Available | Negative | 9505226 - 9506194 | 34945.0 |
| tioe family transcriptional regulator | RAM_RS43625 | Not Available | Positive | 9506212 - 9506913 | 25258.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
