Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein yhjd | RAM_RS04280 | Not Available | Positive | 899145 - 900155 | 35721.3 |
| acyl-coa dehydrogenase family protein | RAM_RS04285 | Not Available | Positive | 900214 - 901323 | 38934.2 |
| winged helix-turn-helix transcriptional regulator | RAM_RS04290 | Not Available | Positive | 901320 - 901757 | 15747.0 |
| d-alanyl-d-alanine carboxypeptidase family protein | RAM_RS04295 | Not Available | Negative | 901754 - 902998 | 42338.8 |
| sco4848 family membrane protein | RAM_RS04300 | Not Available | Positive | 903042 - 903281 | 8801.71 |
| s8 family peptidase | RAM_RS04305 | Not Available | Positive | 903345 - 904742 | 47348.6 |
| hypothetical protein | RAM_RS04310 | Not Available | Negative | 905030 - 905944 | 34033.4 |
| succinate dehydrogenase iron-sulfur subunit | RAM_RS04315 | Not Available | Negative | 906075 - 906845 | 28919.4 |
| succinate dehydrogenase flavoprotein subunit | RAM_RS04320 | Not Available | Negative | 906845 - 908599 | 64318.6 |
| succinate dehydrogenase hydrophobic membrane anchor subunit | RAM_RS04325 | Not Available | Negative | 908620 - 909033 | 15702.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
