Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein | RAM_RS42940 | Not Available | Negative | 9364561 - 9365169 | 21709.8 |
| duf742 domain-containing protein | RAM_RS42945 | Not Available | Negative | 9365150 - 9365929 | 28520.2 |
| roadblock/lc7 domain-containing protein | RAM_RS42950 | Not Available | Negative | 9365955 - 9366416 | 15728.9 |
| nitrate- and nitrite sensing domain-containing protein | RAM_RS42955 | Not Available | Negative | 9366437 - 9369577 | 111843.0 |
| abc transporter substrate-binding protein | RAM_RS42960 | Not Available | Positive | 9370302 - 9371306 | 35172.4 |
| abc transporter permease | RAM_RS42965 | Not Available | Positive | 9371308 - 9372078 | 26866.7 |
| abc transporter permease | RAM_RS42970 | Not Available | Positive | 9372075 - 9372908 | 29741.8 |
| abc transporter atp-binding protein | RAM_RS42975 | Not Available | Positive | 9372928 - 9373788 | 30716.3 |
| benzoylformate decarboxylase | RAM_RS42980 | Not Available | Negative | 9373850 - 9375436 | 55652.4 |
| duf397 domain-containing protein | RAM_RS48205 | Not Available | Negative | 9375446 - 9375607 | 5788.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
