Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s single cluster domain-containing protein | RAM_RS42800 | Not Available | Positive | 9338946 - 9339521 | 20630.6 |
| hypothetical protein | RAM_RS42805 | Not Available | Positive | 9339518 - 9339961 | 15538.7 |
| helix-hairpin-helix domain-containing protein | RAM_RS42810 | Not Available | Positive | 9339958 - 9341160 | 41827.4 |
| esx secretion-associated protein espg | RAM_RS42815 | Not Available | Positive | 9341196 - 9341897 | 25882.6 |
| hypothetical protein | RAM_RS42820 | Not Available | Positive | 9341969 - 9342466 | 17604.6 |
| duf3558 family protein | RAM_RS48195 | Not Available | Positive | 9342463 - 9343023 | 18807.0 |
| hypothetical protein | RAM_RS42825 | Not Available | Positive | 9343038 - 9344486 | 48333.9 |
| phzf family phenazine biosynthesis protein | RAM_RS42830 | Not Available | Positive | 9344551 - 9345300 | 26942.8 |
| yccf domain-containing protein | RAM_RS42835 | Not Available | Positive | 9345300 - 9345674 | 13511.2 |
| metallophosphoesterase | RAM_RS42840 | Not Available | Negative | 9345671 - 9346471 | 29045.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
