Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chitinase | RAM_RS42200 | Not Available | Positive | 9221297 - 9222661 | 46865.7 |
| gntr family transcriptional regulator | RAM_RS42205 | Not Available | Negative | 9222883 - 9223605 | 26727.0 |
| mfs transporter | RAM_RS42210 | Not Available | Positive | 9223723 - 9224967 | 43903.9 |
| putative hydro-lyase | RAM_RS42215 | Not Available | Positive | 9224978 - 9225772 | 28871.0 |
| lamb/ycsf family protein | RAM_RS42220 | Not Available | Positive | 9225774 - 9226526 | 25870.7 |
| 5-oxoprolinase subunit b family protein | RAM_RS42225 | Not Available | Positive | 9226523 - 9227134 | 21288.4 |
| biotin-dependent carboxyltransferase family protein | RAM_RS42230 | Not Available | Positive | 9227131 - 9227964 | 28496.4 |
| hypothetical protein | RAM_RS42235 | Not Available | Negative | 9227998 - 9228237 | 8815.55 |
| hypothetical protein | RAM_RS42240 | Not Available | Negative | 9228230 - 9228583 | 12418.3 |
| arsr/smtb family transcription factor | RAM_RS42245 | Not Available | Positive | 9228667 - 9229248 | 21730.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
