Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | RAM_RS42150 | Not Available | Negative | 9208117 - 9209115 | 36241.1 |
| abc transporter permease | RAM_RS42155 | Not Available | Negative | 9209115 - 9210107 | 35027.9 |
| abc transporter permease | RAM_RS42160 | Not Available | Negative | 9210109 - 9211089 | 35182.2 |
| abc transporter atp-binding protein | RAM_RS42165 | Not Available | Negative | 9211086 - 9212153 | 38876.7 |
| abc transporter substrate-binding protein | RAM_RS42170 | Not Available | Negative | 9212171 - 9213802 | 59888.4 |
| rok family transcriptional regulator | RAM_RS42175 | Not Available | Negative | 9214050 - 9215237 | 40275.4 |
| rok family transcriptional regulator | RAM_RS42180 | Not Available | Positive | 9215371 - 9216606 | 42447.4 |
| glycoside hydrolase family 16 protein | RAM_RS42185 | Not Available | Positive | 9217111 - 9218322 | 42826.3 |
| ricin domain-containing protein | RAM_RS51385 | Not Available | Positive | 9218560 - 9219444 | 30307.8 |
| ricin-type beta-trefoil lectin domain protein | RAM_RS42195 | Not Available | Positive | 9219441 - 9221300 | 65629.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
