Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RAM_RS04130 | Not Available | Positive | 870857 - 871552 | 23386.3 |
| dna polymerase y family protein | RAM_RS04135 | Not Available | Positive | 872016 - 873578 | 55258.1 |
| hypothetical protein | RAM_RS04140 | Not Available | Positive | 873581 - 874111 | 19749.6 |
| error-prone dna polymerase | RAM_RS04145 | Not Available | Positive | 874112 - 877423 | 121458.0 |
| class i sam-dependent methyltransferase | RAM_RS04150 | Not Available | Negative | 877395 - 878144 | 27813.1 |
| pentapeptide repeat-containing protein | RAM_RS04155 | Not Available | Positive | 878273 - 878860 | 20986.8 |
| glycohydrolase toxin tnt-related protein | RAM_RS04160 | Not Available | Negative | 878907 - 881927 | 109550.0 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | RAM_RS04165 | Not Available | Positive | 882151 - 883005 | 29517.8 |
| duf3017 domain-containing protein | RAM_RS04170 | Not Available | Positive | 883005 - 883328 | 11296.2 |
| mfs transporter | RAM_RS04175 | Not Available | Negative | 883379 - 884563 | 39984.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
