Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor domain-containing diguanylate cyclase | RAM_RS41455 | Not Available | Positive | 9056745 - 9058499 | 63501.3 |
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | RAM_RS41460 | Not Available | Positive | 9058651 - 9060123 | 50214.3 |
| ribose-phosphate diphosphokinase | RAM_RS41465 | Not Available | Positive | 9060120 - 9061100 | 35575.9 |
| tigr03621 family f420-dependent llm class oxidoreductase | RAM_RS41470 | Not Available | Positive | 9061164 - 9062030 | 31906.8 |
| nad(p)-dependent oxidoreductase | RAM_RS41475 | Not Available | Negative | 9062024 - 9062665 | 22594.5 |
| hypothetical protein | RAM_RS41480 | Not Available | Negative | 9062764 - 9063858 | 37444.2 |
| 50s ribosomal protein l25/general stress protein ctc | RAM_RS41485 | Not Available | Positive | 9064210 - 9064809 | 21348.3 |
| aminoacyl-trna hydrolase | RAM_RS41490 | Not Available | Positive | 9064819 - 9065412 | 20947.1 |
| diviva domain-containing protein | RAM_RS51250 | Not Available | Positive | 9065434 - 9065754 | 12109.2 |
| diviva domain-containing protein | RAM_RS41500 | Not Available | Positive | 9065946 - 9066302 | 13011.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
