Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-forming succinate--coa ligase subunit beta | RAM_RS04080 | Not Available | Positive | 860851 - 862020 | 40737.5 |
| succinate--coa ligase subunit alpha | RAM_RS04085 | Not Available | Positive | 862022 - 862912 | 30391.6 |
| duf5336 domain-containing protein | RAM_RS04090 | Not Available | Positive | 863183 - 863983 | 26750.8 |
| duf6350 family protein | RAM_RS04095 | Not Available | Positive | 864120 - 865613 | 49673.3 |
| phosphoribosylglycinamide formyltransferase | RAM_RS04100 | Not Available | Positive | 865691 - 866308 | 21873.3 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | RAM_RS04105 | Not Available | Positive | 866298 - 867866 | 54940.7 |
| hypothetical protein | RAM_RS04110 | Not Available | Positive | 868020 - 868799 | 26946.0 |
| hypothetical protein | RAM_RS04115 | Not Available | Negative | 868796 - 869566 | 26443.3 |
| gnat family n-acetyltransferase | RAM_RS04120 | Not Available | Negative | 869612 - 870100 | 18108.7 |
| hd domain-containing protein | RAM_RS04125 | Not Available | Positive | 870154 - 870702 | 19704.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
