Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron uptake system protein efeo | RAM_RS41310 | Not Available | Positive | 9029919 - 9031064 | 40228.1 |
| iron uptake transporter deferrochelatase/peroxidase subunit | RAM_RS41315 | Not Available | Positive | 9031061 - 9032335 | 45032.0 |
| tetr/acrr family transcriptional regulator | RAM_RS41320 | Not Available | Positive | 9032398 - 9032967 | 20271.1 |
| gdsl-type esterase/lipase family protein | RAM_RS41325 | Not Available | Positive | 9032964 - 9034097 | 39891.6 |
| ppox class f420-dependent oxidoreductase | RAM_RS41330 | Not Available | Positive | 9034131 - 9034541 | 15531.3 |
| hypothetical protein | RAM_RS41335 | Not Available | Negative | 9034563 - 9035126 | 19267.4 |
| hypothetical protein | RAM_RS41340 | Not Available | Negative | 9035123 - 9036472 | 47512.8 |
| abc transporter atp-binding protein | RAM_RS41345 | Not Available | Negative | 9036469 - 9037272 | 28554.6 |
| zf-hc2 domain-containing protein | RAM_RS41350 | Not Available | Negative | 9037308 - 9038096 | 28095.9 |
| rna polymerase sigma factor | RAM_RS41355 | Not Available | Negative | 9038093 - 9038650 | 20147.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
