Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vii secretion target | RAM_RS40770 | Not Available | Positive | 8904413 - 8904721 | 10758.6 |
| hypothetical protein | RAM_RS40775 | Not Available | Positive | 8904721 - 8908269 | 122917.0 |
| hypothetical protein | RAM_RS40780 | Not Available | Positive | 8908266 - 8908820 | 20480.1 |
| hypothetical protein | RAM_RS40785 | Not Available | Positive | 8908914 - 8909747 | 30355.2 |
| threonine ammonia-lyase | RAM_RS40790 | Not Available | Negative | 8909785 - 8910987 | 41843.9 |
| hypothetical protein | RAM_RS40795 | Not Available | Positive | 8911083 - 8911355 | 8904.44 |
| tigr03618 family f420-dependent ppox class oxidoreductase | RAM_RS40800 | Not Available | Positive | 8911437 - 8911910 | 16508.6 |
| cystathionine gamma-synthase | RAM_RS40805 | Not Available | Negative | 8911914 - 8913071 | 41177.0 |
| hypothetical protein | RAM_RS40810 | Not Available | Negative | 8913353 - 8913805 | 15440.3 |
| hypothetical protein | RAM_RS40815 | Not Available | Negative | 8914149 - 8915729 | 51642.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
