Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RAM_RS40275 | Not Available | Positive | 8795278 - 8795727 | 16860.3 |
| fad-dependent oxidoreductase | RAM_RS40280 | Not Available | Positive | 8795815 - 8797866 | 72600.7 |
| dtmp kinase | RAM_RS40285 | Not Available | Negative | 8797895 - 8798548 | 23399.7 |
| hypothetical protein | RAM_RS40290 | Not Available | Negative | 8798714 - 8799469 | 25732.2 |
| papain-like cysteine protease family protein | RAM_RS40295 | Not Available | Negative | 8799466 - 8800068 | 21593.3 |
| hypothetical protein | RAM_RS40300 | Not Available | Positive | 8800316 - 8801314 | 36693.8 |
| yjdf family protein | RAM_RS40305 | Not Available | Negative | 8801626 - 8802051 | 15489.4 |
| type ii toxin-antitoxin system vapc family toxin | RAM_RS40310 | Not Available | Negative | 8802201 - 8802644 | 16051.2 |
| toxin-antitoxin system hicb family antitoxin | RAM_RS40315 | Not Available | Negative | 8802638 - 8802925 | 10653.6 |
| adenosylhomocysteinase | RAM_RS40320 | Not Available | Negative | 8803036 - 8804508 | 53940.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
