Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydantoinase/oxoprolinase family protein | RAM_RS39580 | Not Available | Negative | 8648387 - 8650408 | 71121.1 |
| thiamine pyrophosphate-binding protein | RAM_RS39585 | Not Available | Negative | 8650405 - 8652027 | 57566.0 |
| metal-dependent hydrolase | RAM_RS39590 | Not Available | Negative | 8652072 - 8652817 | 24862.9 |
| ws/dgat/mgat family o-acyltransferase | RAM_RS39595 | Not Available | Positive | 8652910 - 8654274 | 50157.6 |
| pyrroloquinoline quinone precursor peptide pqqa | RAM_RS39600 | Not Available | Positive | 8654392 - 8654478 | 3297.82 |
| pyrroloquinoline-quinone synthase pqqc | RAM_RS39605 | Not Available | Positive | 8654483 - 8655172 | 26103.2 |
| pyrroloquinoline quinone biosynthesis peptide chaperone pqqd | RAM_RS39610 | Not Available | Positive | 8655169 - 8655435 | 9657.76 |
| pyrroloquinoline quinone biosynthesis protein pqqe | RAM_RS39615 | Not Available | Positive | 8655426 - 8656490 | 38345.1 |
| pyrroloquinoline quinone biosynthesis protein pqqb | RAM_RS39620 | Not Available | Positive | 8656487 - 8657314 | 28610.4 |
| mfs transporter | RAM_RS39625 | Not Available | Positive | 8657423 - 8658646 | 41509.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
