Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate binding domain-containing protein | RAM_RS39440 | Not Available | Positive | 8620031 - 8621911 | 63616.2 |
| hypothetical protein | RAM_RS39445 | Not Available | Positive | 8622021 - 8622806 | 29068.4 |
| hypothetical protein | RAM_RS49370 | Not Available | Positive | 8622936 - 8623109 | 5729.96 |
| glycoside hydrolase family 44 protein | RAM_RS39450 | Not Available | Positive | 8623334 - 8625199 | 65363.5 |
| merr family transcriptional regulator | RAM_RS39455 | Not Available | Negative | 8625366 - 8625698 | 12181.2 |
| hypothetical protein | RAM_RS39460 | Not Available | Positive | 8626435 - 8626695 | 9364.08 |
| atp-binding protein | RAM_RS39465 | Not Available | Negative | 8626795 - 8627247 | 15863.8 |
| pectate lyase | RAM_RS39470 | Not Available | Positive | 8627828 - 8628997 | 40605.6 |
| yggt family protein | RAM_RS39475 | Not Available | Positive | 8629136 - 8629411 | 9788.56 |
| tetr/acrr family transcriptional regulator | RAM_RS39480 | Not Available | Negative | 8629408 - 8630067 | 23585.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
