Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RAM_RS39390 | Not Available | Positive | 8600383 - 8601540 | 44146.1 |
| glycoside hydrolase family 28 protein | RAM_RS39395 | Not Available | Negative | 8601668 - 8603218 | 55199.1 |
| pqq-dependent sugar dehydrogenase | RAM_RS39400 | Not Available | Negative | 8603333 - 8605417 | 72499.0 |
| ricin-type beta-trefoil lectin domain protein | RAM_RS39405 | Not Available | Negative | 8605621 - 8607201 | 55128.0 |
| non-reducing end alpha-l-arabinofuranosidase family hydrolase | RAM_RS39410 | Not Available | Positive | 8608436 - 8609887 | 52006.3 |
| glycoside hydrolase family 44 protein | RAM_RS39415 | Not Available | Positive | 8609993 - 8612206 | 77971.4 |
| rok family transcriptional regulator | RAM_RS39420 | Not Available | Positive | 8612305 - 8613513 | 40568.7 |
| sugar-binding domain-containing protein | RAM_RS39425 | Not Available | Positive | 8613930 - 8616536 | 94141.5 |
| ricin-type beta-trefoil lectin domain protein | RAM_RS39430 | Not Available | Positive | 8616574 - 8618031 | 50828.6 |
| ricin-type beta-trefoil lectin domain protein | RAM_RS39435 | Not Available | Positive | 8618127 - 8619965 | 63410.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
