Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | RAM_RS39295 | Not Available | Negative | 8582107 - 8582835 | 26790.7 |
| nad(p)-dependent alcohol dehydrogenase | RAM_RS39300 | Not Available | Positive | 8583072 - 8583956 | 31734.1 |
| hypothetical protein | RAM_RS50850 | Not Available | Negative | 8584151 - 8584330 | 6578.13 |
| tigr03086 family metal-binding protein | RAM_RS39310 | Not Available | Negative | 8585061 - 8585630 | 19925.5 |
| helix-turn-helix domain-containing protein | RAM_RS39315 | Not Available | Positive | 8585695 - 8586438 | 27999.5 |
| metal-dependent hydrolase | RAM_RS50855 | Not Available | Positive | 8586782 - 8587060 | 9872.76 |
| yybh family protein | RAM_RS39325 | Not Available | Negative | 8587039 - 8587404 | 13401.9 |
| hypothetical protein | RAM_RS50860 | Not Available | Negative | 8587391 - 8587561 | 5998.38 |
| hypothetical protein | RAM_RS50865 | Not Available | Positive | 8587692 - 8587838 | 5225.64 |
| is3 family transposase | RAM_RS49960 | Not Available | Positive | 8588102 - 8588425 | 11988.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
