Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate decarboxylase | RAM_RS39245 | Not Available | Negative | 8572991 - 8574421 | 51150.6 |
| arginine--trna ligase | RAM_RS39250 | Not Available | Negative | 8574425 - 8576086 | 59547.4 |
| duf3105 domain-containing protein | RAM_RS39255 | Not Available | Positive | 8576283 - 8577101 | 28503.7 |
| duf305 domain-containing protein | RAM_RS39260 | Not Available | Positive | 8577098 - 8577811 | 25629.9 |
| rip homotypic interaction motif-containing protein | RAM_RS39265 | Not Available | Negative | 8577815 - 8578153 | 11479.6 |
| cation diffusion facilitator family transporter | RAM_RS39270 | Not Available | Negative | 8578220 - 8579140 | 31808.1 |
| marr family winged helix-turn-helix transcriptional regulator | RAM_RS39275 | Not Available | Negative | 8579294 - 8579713 | 15192.5 |
| sdr family oxidoreductase | RAM_RS39280 | Not Available | Positive | 8579820 - 8580656 | 28780.1 |
| epoxide hydrolase family protein | RAM_RS39285 | Not Available | Negative | 8580653 - 8581753 | 40646.5 |
| Trna-arg | Not Available | Not Available | Positive | 8581904 - 8581976 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
