Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | RAM_RS38070 | Not Available | Positive | 8350532 - 8352100 | 55546.4 |
| choline dehydrogenase | RAM_RS38075 | Not Available | Positive | 8352109 - 8353767 | 61089.4 |
| is4 family transposase | RAM_RS38080 | Not Available | Positive | 8353920 - 8355302 | 49429.3 |
| bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit | RAM_RS38085 | Not Available | Positive | 8355506 - 8355826 | 11273.3 |
| nad(p)/fad-dependent oxidoreductase | RAM_RS38090 | Not Available | Positive | 8355823 - 8356956 | 38796.4 |
| putative immunity protein | RAM_RS38095 | Not Available | Positive | 8356995 - 8357516 | 17817.2 |
| alpha/beta fold hydrolase | RAM_RS38100 | Not Available | Negative | 8357548 - 8358486 | 33384.6 |
| tetr/acrr family transcriptional regulator | RAM_RS38105 | Not Available | Positive | 8358571 - 8359191 | 21853.9 |
| hypothetical protein | RAM_RS38110 | Not Available | Negative | 8359188 - 8360162 | 35453.3 |
| hypothetical protein | RAM_RS38115 | Not Available | Negative | 8360159 - 8360707 | 19358.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
