Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formyltetrahydrofolate deformylase | RAM_RS38020 | Not Available | Negative | 8339641 - 8340483 | 31157.2 |
| sarcosine oxidase subunit gamma | RAM_RS38025 | Not Available | Negative | 8340480 - 8340998 | 18587.2 |
| 2fe-2s iron-sulfur cluster-binding protein | RAM_RS38030 | Not Available | Negative | 8340988 - 8343525 | 91337.7 |
| sarcosine oxidase subunit delta | RAM_RS38035 | Not Available | Negative | 8343522 - 8343800 | 10648.4 |
| sarcosine oxidase subunit beta family protein | RAM_RS38040 | Not Available | Negative | 8343826 - 8345037 | 43224.5 |
| serine hydroxymethyltransferase | RAM_RS38045 | Not Available | Negative | 8345034 - 8346296 | 45285.1 |
| gntr family transcriptional regulator | RAM_RS38050 | Not Available | Positive | 8346354 - 8347001 | 23687.6 |
| aromatic ring-hydroxylating oxygenase subunit alpha | RAM_RS38055 | Not Available | Negative | 8347011 - 8348132 | 41346.1 |
| tetr/acrr family transcriptional regulator | RAM_RS38060 | Not Available | Negative | 8348407 - 8348985 | 20815.7 |
| aldehyde dehydrogenase family protein | RAM_RS38065 | Not Available | Positive | 8349032 - 8350498 | 52221.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
