Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding and vwa domain-containing protein | RAM_RS37970 | Not Available | Negative | 8326190 - 8327770 | 55152.8 |
| hypothetical protein | RAM_RS37975 | Not Available | Positive | 8328031 - 8328822 | 28074.9 |
| plp-dependent aminotransferase family protein | RAM_RS37980 | Not Available | Negative | 8328826 - 8330226 | 49946.9 |
| carboxymuconolactone decarboxylase family protein | RAM_RS37985 | Not Available | Positive | 8330274 - 8330735 | 16700.0 |
| mfs transporter | RAM_RS37990 | Not Available | Positive | 8330732 - 8332132 | 46431.2 |
| mfs transporter | RAM_RS37995 | Not Available | Negative | 8332249 - 8333706 | 50158.0 |
| marr family winged helix-turn-helix transcriptional regulator | RAM_RS38000 | Not Available | Positive | 8333793 - 8334167 | 14081.8 |
| is4 family transposase | RAM_RS38005 | Not Available | Negative | 8334184 - 8335566 | 49459.4 |
| s1c family serine protease | RAM_RS38010 | Not Available | Negative | 8335719 - 8337095 | 46704.2 |
| gcvt family protein | RAM_RS38015 | Not Available | Negative | 8337190 - 8339616 | 87914.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
