Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase family protein | RAM_RS37675 | Not Available | Negative | 8263753 - 8264967 | 42635.3 |
| antar domain-containing response regulator | RAM_RS37680 | Not Available | Negative | 8265128 - 8265853 | 26344.6 |
| duf3140 domain-containing protein | RAM_RS37685 | Not Available | Positive | 8266027 - 8266362 | 12748.8 |
| ricin domain-containing protein | RAM_RS37690 | Not Available | Negative | 8266465 - 8268408 | 68530.9 |
| glycoside hydrolase family 35 protein | RAM_RS37695 | Not Available | Negative | 8268486 - 8270240 | 64000.9 |
| alpha-n-arabinofuranosidase | RAM_RS37700 | Not Available | Negative | 8270233 - 8271777 | 55841.6 |
| abc transporter substrate-binding protein | RAM_RS37705 | Not Available | Negative | 8271774 - 8273114 | 47035.8 |
| carbohydrate abc transporter permease | RAM_RS37710 | Not Available | Negative | 8273164 - 8274027 | 31025.5 |
| carbohydrate abc transporter permease | RAM_RS37715 | Not Available | Negative | 8274029 - 8274955 | 33907.0 |
| laci family dna-binding transcriptional regulator | RAM_RS37720 | Not Available | Positive | 8275067 - 8276122 | 37340.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
