Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhamnogalacturonan lyase | RAM_RS37335 | Not Available | Negative | 8187868 - 8189691 | 64683.3 |
| rhamnogalacturonan acetylesterase | RAM_RS37340 | Not Available | Negative | 8189711 - 8190766 | 35738.8 |
| cellulase family glycosylhydrolase | RAM_RS37345 | Not Available | Negative | 8190805 - 8193072 | 78098.9 |
| arabinogalactan endo-beta-1,4-galactanase | RAM_RS37350 | Not Available | Negative | 8193242 - 8194414 | 41656.6 |
| laci family dna-binding transcriptional regulator | RAM_RS37355 | Not Available | Negative | 8194411 - 8195469 | 37237.9 |
| hypothetical protein | RAM_RS37360 | Not Available | Negative | 8195466 - 8196023 | 18828.7 |
| carbohydrate abc transporter permease | RAM_RS37365 | Not Available | Negative | 8196020 - 8196850 | 30710.1 |
| carbohydrate abc transporter permease | RAM_RS37370 | Not Available | Negative | 8196847 - 8197788 | 34285.1 |
| abc transporter substrate-binding protein | RAM_RS37375 | Not Available | Negative | 8197800 - 8199086 | 44659.9 |
| hypothetical protein | RAM_RS37380 | Not Available | Positive | 8199371 - 8202097 | 99109.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
