Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative glycoside hydrolase family 15 protein | RAM_RS37285 | Not Available | Negative | 8175444 - 8176850 | 50834.7 |
| exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase | RAM_RS37290 | Not Available | Negative | 8176832 - 8178262 | 51502.9 |
| glycosyltransferase | RAM_RS37295 | Not Available | Positive | 8178577 - 8179407 | 30018.1 |
| nad(p)/fad-dependent oxidoreductase | RAM_RS37300 | Not Available | Positive | 8179412 - 8180722 | 47703.1 |
| non-hydrolyzing udp-n-acetylglucosamine 2-epimerase | RAM_RS37305 | Not Available | Negative | 8180692 - 8181867 | 41632.9 |
| lysyl oxidase family protein | RAM_RS37310 | Not Available | Positive | 8182030 - 8182971 | 33046.1 |
| meds domain-containing protein | RAM_RS37315 | Not Available | Negative | 8182928 - 8183692 | 26351.9 |
| voc family protein | RAM_RS37320 | Not Available | Negative | 8183839 - 8184216 | 13820.2 |
| right-handed parallel beta-helix repeat-containing protein | RAM_RS37325 | Not Available | Negative | 8184345 - 8185661 | 45987.8 |
| glycoside hydrolase family 2 | RAM_RS37330 | Not Available | Negative | 8185676 - 8187868 | 76122.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
