Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RAM_RS37235 | Not Available | Negative | 8164615 - 8164983 | 12030.0 |
| hypothetical protein | RAM_RS37240 | Not Available | Positive | 8165407 - 8166243 | 26932.5 |
| polysaccharide deacetylase family protein | RAM_RS37245 | Not Available | Positive | 8166240 - 8167205 | 34894.8 |
| o-antigen ligase family protein | RAM_RS37250 | Not Available | Positive | 8167202 - 8168437 | 42653.0 |
| glycosyltransferase | RAM_RS37255 | Not Available | Positive | 8168412 - 8169464 | 36399.0 |
| hypothetical protein | RAM_RS37260 | Not Available | Positive | 8169461 - 8170315 | 28061.3 |
| glycosyltransferase 87 family protein | RAM_RS37265 | Not Available | Positive | 8170312 - 8171658 | 46647.4 |
| oligosaccharide flippase family protein | RAM_RS37270 | Not Available | Positive | 8171655 - 8173079 | 47810.8 |
| glycosyltransferase | RAM_RS37275 | Not Available | Positive | 8173076 - 8174185 | 39214.3 |
| glycosyltransferase family 4 protein | RAM_RS37280 | Not Available | Positive | 8174182 - 8175312 | 39547.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
