Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubp-type zinc finger domain-containing protein | RAM_RS37185 | Not Available | Negative | 8154002 - 8154352 | 12485.2 |
| glycoside hydrolase family 5 protein | RAM_RS37190 | Not Available | Positive | 8154593 - 8155792 | 43452.9 |
| abc transporter permease | RAM_RS37195 | Not Available | Negative | 8155811 - 8156536 | 25889.8 |
| abc transporter atp-binding protein | RAM_RS37200 | Not Available | Negative | 8156533 - 8157258 | 25721.3 |
| glycoside hydrolase family 9 protein | RAM_RS37205 | Not Available | Negative | 8157427 - 8160306 | 99474.2 |
| glycoside hydrolase family 27 protein | RAM_RS37210 | Not Available | Positive | 8160548 - 8162176 | 57054.6 |
| hypothetical protein | RAM_RS37215 | Not Available | Positive | 8162461 - 8162694 | 8186.78 |
| hypothetical protein | RAM_RS37220 | Not Available | Negative | 8162957 - 8163310 | 11574.6 |
| antar domain-containing protein | RAM_RS37225 | Not Available | Negative | 8163721 - 8164077 | 11951.1 |
| hypothetical protein | RAM_RS37230 | Not Available | Negative | 8164158 - 8164508 | 11358.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
