Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sgnh/gdsl hydrolase family protein | RAM_RS37135 | Not Available | Positive | 8139818 - 8140666 | 30515.2 |
| hypothetical protein | RAM_RS37140 | Not Available | Positive | 8140836 - 8141333 | 17674.2 |
| amidase | RAM_RS37145 | Not Available | Positive | 8141595 - 8143064 | 52235.4 |
| hypothetical protein | RAM_RS37150 | Not Available | Positive | 8143113 - 8143958 | 28190.8 |
| alcohol dehydrogenase catalytic domain-containing protein | RAM_RS37155 | Not Available | Negative | 8143960 - 8145045 | 37282.9 |
| lysr family transcriptional regulator | RAM_RS37160 | Not Available | Positive | 8145137 - 8146036 | 30729.2 |
| ricin domain-containing protein | RAM_RS37165 | Not Available | Positive | 8146316 - 8149372 | 107655.0 |
| duf6204 family protein | RAM_RS37170 | Not Available | Negative | 8149474 - 8149788 | 11611.8 |
| glycoside hydrolase family 3 n-terminal domain-containing protein | RAM_RS37175 | Not Available | Positive | 8149920 - 8152181 | 78429.3 |
| tigr01777 family oxidoreductase | RAM_RS37180 | Not Available | Negative | 8152229 - 8153320 | 38375.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
