Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RAM_RS03625 | Not Available | Negative | 764215 - 764934 | 25769.5 |
| type vii secretion protein ecce | RAM_RS03630 | Not Available | Negative | 765008 - 766189 | 41453.3 |
| type vii secretion protein eccb | RAM_RS03640 | Not Available | Positive | 766862 - 768499 | 57297.2 |
| hypothetical protein | RAM_RS03645 | Not Available | Positive | 768564 - 768881 | 10570.3 |
| wxg100 family type vii secretion target | RAM_RS03650 | Not Available | Positive | 768878 - 769954 | 37199.1 |
| s8 family serine peptidase | RAM_RS03655 | Not Available | Negative | 769964 - 771574 | 55406.3 |
| type vii secretion integral membrane protein eccd | RAM_RS03660 | Not Available | Negative | 771595 - 772959 | 46245.1 |
| type vii secretion protein eccc | RAM_RS03665 | Not Available | Positive | 773318 - 777331 | 146617.0 |
| type vii secretion-associated protein | RAM_RS03670 | Not Available | Positive | 777537 - 779528 | 70572.0 |
| hypothetical protein | RAM_RS03675 | Not Available | Positive | 779543 - 779890 | 12671.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
