Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase family protein | RAM_RS36615 | Not Available | Negative | 8019310 - 8019945 | 23376.0 |
| caib/baif coa transferase family protein | RAM_RS36620 | Not Available | Negative | 8019998 - 8021179 | 42255.3 |
| glutathione s-transferase | RAM_RS36625 | Not Available | Negative | 8021176 - 8021823 | 23991.7 |
| gntr family transcriptional regulator | RAM_RS36630 | Not Available | Negative | 8021906 - 8022643 | 27266.5 |
| mfs transporter | RAM_RS36635 | Not Available | Negative | 8022700 - 8024010 | 46609.6 |
| fumarate hydratase | RAM_RS36640 | Not Available | Positive | 8024158 - 8025027 | 30966.2 |
| fumarate hydratase c-terminal domain-containing protein | RAM_RS36645 | Not Available | Positive | 8025041 - 8025673 | 23022.8 |
| 3-hydroxyacyl-coa dehydrogenase family protein | RAM_RS36650 | Not Available | Positive | 8025670 - 8026530 | 30183.3 |
| hypothetical protein | RAM_RS36655 | Not Available | Negative | 8026565 - 8026846 | 10340.2 |
| n-6 dna methylase | RAM_RS36660 | Not Available | Negative | 8026887 - 8027747 | 30174.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
