Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i methionyl aminopeptidase | RAM_RS03575 | Not Available | Positive | 758240 - 759016 | 26762.7 |
| translation initiation factor if-1 | RAM_RS03580 | Not Available | Positive | 759274 - 759495 | 8475.43 |
| 50s ribosomal protein l36 | RAM_RS03585 | Not Available | Positive | 759533 - 759646 | 4417.7 |
| 30s ribosomal protein s13 | RAM_RS03590 | Not Available | Positive | 759853 - 760233 | 14436.7 |
| hypothetical protein | RAM_RS03595 | Not Available | Positive | 760230 - 760415 | 6556.0 |
| 30s ribosomal protein s11 | RAM_RS03600 | Not Available | Positive | 760434 - 760841 | 14355.3 |
| 30s ribosomal protein s4 | RAM_RS03605 | Not Available | Positive | 760865 - 761470 | 23312.3 |
| dna-directed rna polymerase subunit alpha | RAM_RS03610 | Not Available | Positive | 761578 - 762648 | 38199.2 |
| 50s ribosomal protein l17 | RAM_RS03615 | Not Available | Positive | 762693 - 763241 | 19808.4 |
| trna pseudouridine(38-40) synthase trua | RAM_RS03620 | Not Available | Positive | 763315 - 764145 | 30017.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
