Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | RAM_RS35440 | Not Available | Positive | 7790102 - 7790788 | 25630.0 |
| voc family protein | RAM_RS35445 | Not Available | Negative | 7790772 - 7791128 | 12551.5 |
| rv2231c family pyridoxal phosphate-dependent protein cobc | RAM_RS35450 | Not Available | Negative | 7791210 - 7792226 | 35420.4 |
| cobyrinate a,c-diamide synthase | RAM_RS35455 | Not Available | Negative | 7792219 - 7793556 | 46095.0 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | RAM_RS35460 | Not Available | Negative | 7793550 - 7794164 | 22726.9 |
| putative cobaltochelatase | RAM_RS35465 | Not Available | Negative | 7794164 - 7796104 | 68209.4 |
| bifunctional cobalt-precorrin-7 (c(5))-methyltransferase/cobalt-precorrin-6b (c(15))-methyltransferase | RAM_RS35470 | Not Available | Positive | 7796173 - 7797357 | 40742.7 |
| precorrin-4 c(11)-methyltransferase | RAM_RS35475 | Not Available | Positive | 7797354 - 7798115 | 26383.8 |
| gfo/idh/moca family protein | RAM_RS35480 | Not Available | Positive | 7798112 - 7799128 | 36103.7 |
| cobalt-precorrin-6a reductase | RAM_RS35485 | Not Available | Positive | 7799125 - 7799844 | 25960.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
