Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase | RAM_RS35245 | Not Available | Positive | 7745819 - 7746445 | 21585.5 |
| plp-dependent aminotransferase family protein | RAM_RS35250 | Not Available | Negative | 7746453 - 7747856 | 49830.7 |
| mfs transporter | RAM_RS35255 | Not Available | Positive | 7747904 - 7749058 | 38656.0 |
| fpg/nei family dna glycosylase | RAM_RS35260 | Not Available | Positive | 7749074 - 7749865 | 28843.3 |
| dinb family protein | RAM_RS47985 | Not Available | Negative | 7749756 - 7750319 | 19870.3 |
| pig-l family deacetylase | RAM_RS35265 | Not Available | Positive | 7750395 - 7751189 | 28923.1 |
| s-methyl-5-thioribose-1-phosphate isomerase | RAM_RS35270 | Not Available | Positive | 7751671 - 7752660 | 34502.4 |
| hypothetical protein | RAM_RS35275 | Not Available | Negative | 7752685 - 7753125 | 15016.7 |
| ferredoxin | RAM_RS35280 | Not Available | Negative | 7753229 - 7753444 | 7396.72 |
| cytochrome p450 | RAM_RS35285 | Not Available | Negative | 7753448 - 7754638 | 43956.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
