Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | RAM_RS34800 | Not Available | Positive | 7645562 - 7648153 | 94451.9 |
| lasso peptide biosynthesis b2 protein | RAM_RS34805 | Not Available | Negative | 7648158 - 7648865 | 25568.9 |
| lasso peptide isopeptide bond-forming cyclase | RAM_RS34810 | Not Available | Negative | 7648862 - 7650613 | 62798.0 |
| hypothetical protein | RAM_RS49315 | Not Available | Negative | 7650661 - 7650810 | 5242.88 |
| rok family transcriptional regulator | RAM_RS34815 | Not Available | Positive | 7651076 - 7652296 | 43275.2 |
| hypothetical protein | RAM_RS34820 | Not Available | Positive | 7652562 - 7653920 | 50039.6 |
| lvivd repeat-containing protein | RAM_RS34825 | Not Available | Negative | 7653949 - 7655283 | 47816.8 |
| peptide abc transporter substrate-binding protein | RAM_RS34830 | Not Available | Positive | 7655480 - 7656925 | 50050.4 |
| lysr family transcriptional regulator | RAM_RS34835 | Not Available | Negative | 7657106 - 7657984 | 30818.2 |
| sdr family oxidoreductase | RAM_RS34840 | Not Available | Positive | 7658056 - 7659057 | 36569.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
