Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cpbp family intramembrane glutamic endopeptidase | RAM_RS34655 | Not Available | Positive | 7608774 - 7609508 | 25585.7 |
| metal-sensitive transcriptional regulator | RAM_RS34660 | Not Available | Negative | 7609505 - 7609786 | 10254.3 |
| heavy metal translocating p-type atpase | RAM_RS34665 | Not Available | Negative | 7609843 - 7611939 | 71658.0 |
| heavy-metal-associated domain-containing protein | RAM_RS34670 | Not Available | Negative | 7611936 - 7612142 | 7123.23 |
| precorrin-6a synthase (deacetylating) | RAM_RS34675 | Not Available | Positive | 7612220 - 7612981 | 28161.5 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 7613220 - 7613336 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 7613403 - 7616527 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 7616853 - 7618369 | Not Available |
| alpha/beta fold hydrolase | RAM_RS34695 | Not Available | Positive | 7618819 - 7619607 | 28659.0 |
| sdr family oxidoreductase | RAM_RS34700 | Not Available | Positive | 7619604 - 7620365 | 27048.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
