Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc ribbon domain-containing protein | RAM_RS03380 | Not Available | Positive | 730163 - 730804 | 23193.8 |
| crp/fnr family transcriptional regulator | RAM_RS03385 | Not Available | Positive | 731068 - 731736 | 24292.7 |
| hypothetical protein | RAM_RS03390 | Not Available | Positive | 731877 - 732584 | 24788.2 |
| hypothetical protein | RAM_RS03395 | Not Available | Positive | 732581 - 734602 | 73560.1 |
| hypothetical protein | RAM_RS03400 | Not Available | Positive | 734599 - 735990 | 53953.9 |
| duf4407 domain-containing protein | RAM_RS03405 | Not Available | Positive | 735980 - 737320 | 49504.1 |
| hypothetical protein | RAM_RS03410 | Not Available | Positive | 737387 - 737611 | 7489.38 |
| hypothetical protein | RAM_RS03415 | Not Available | Negative | 737592 - 737873 | 9789.59 |
| hypothetical protein | RAM_RS48420 | Not Available | Negative | 738054 - 738389 | 12536.3 |
| ybab/ebfc family nucleoid-associated protein | RAM_RS03420 | Not Available | Negative | 738389 - 738670 | 9471.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
