Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-grasp ribosomal peptide maturase | RAM_RS34145 | Not Available | Negative | 7488477 - 7489448 | 34663.9 |
| hypothetical protein | RAM_RS34150 | Not Available | Negative | 7489478 - 7489723 | 8579.8 |
| helix-turn-helix domain-containing protein | RAM_RS34155 | Not Available | Negative | 7489934 - 7491133 | 43299.8 |
| had family hydrolase | RAM_RS34160 | Not Available | Positive | 7491223 - 7491939 | 25544.2 |
| smods domain-containing nucleotidyltransferase | RAM_RS47965 | Not Available | Negative | 7492010 - 7492888 | 32527.6 |
| s-4tm family putative pore-forming effector | RAM_RS48895 | Not Available | Negative | 7492872 - 7493834 | 35510.6 |
| nucleotidyltransferase | RAM_RS48900 | Not Available | Positive | 7493997 - 7494875 | 32578.5 |
| sdr family oxidoreductase | RAM_RS34165 | Not Available | Negative | 7495553 - 7496488 | 32184.2 |
| nadph-dependent f420 reductase | RAM_RS34170 | Not Available | Negative | 7496498 - 7497118 | 20326.4 |
| lysr family transcriptional regulator | RAM_RS34175 | Not Available | Positive | 7497257 - 7498168 | 32633.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
